Department of Biochemistry and Molecular Biology

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Department of Biochemistry and Molecular Biology has more than 6 academic staff members

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Prof.Dr. Abdulla Masood Bashein Bashein

عبدالله بشين هو احد اعضاء هيئة التدريس بقسم الكيمياء الحيوية بكلية الطب البشري. يعمل السيد عبدالله بشين بجامعة طرابلس كـأستاذ منذ 2007-04-15 وله العديد من المنشورات العلمية في مجال تخصصه

Publications

Some of publications in Department of Biochemistry and Molecular Biology

A comparative study of alkaline phosphatase level in serum of patients with end-stage renal disease, viral hepatitis (C) and (B)

Alkaline phosphatase (ALP) enzyme level, which is routinely measured at clinical laboratories, increases in end-stage renal disease (ESRD) and hepatitis patients. This study investigated the difference in ALP level among ESRD and hepatitis patients. ALP level was measured in sera of patients suffering from ESRD, HCV and HBV infections, as well as patients suffering from comorbidity of these diseases, then the obtained values of ALP level were statistically compared to a control group. The results of three-Way ANOVA revealed that the mean of ALP level increased significantly (P-value< 0.05) in all types of diseases compared to the control group, with the highest increase in case of ESRD patients infected with Hepatitis B and C. Also, it was found that the interaction of group-gender significantly (P-value< 0.05) altered ALP level in patients suffering from HCV or HBV infections, while the interaction of group-age, gender-age, group-gender-age were found not to significantly alter it. In conclusion, ESRD patients with HBV/HCV coinfection may have a higher risk of liver-related morbidity and mortality than ESRD or HBV or HCV patients. arabic 25 English 103
HA Alemam, A Bashein(1-2020)
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Polymorphisms of the thiopurine S-methyltransferase gene among the Libyan population

Background: Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses the S-methylation of 6-mercaptopurine and azathioprine. Low activity phenotypes are correlated with polymorphism in the TPMT gene. Patients with low or undetectable TMPT activity could develop severe myelosuppression when they are treated with standard doses of thiopurine drugs. Since ethnic differences in the TPMT gene polymorphism have been demonstrated worldwide, assessing it in the Libyan population is worthwhile. Methods: We investigated TPMT gene polymorphism in a total of 246 Libyan healthy adult blood donors from three different Libyan regions (Tripoli, Yefren, and Tawargha) and 50 children with acute lymphoblastic leukaemia (ALL). We used polymerase chain reaction restriction length polymorphism (PCR-RFLP) and allele-specific PCR-based assays to analyse the TPMT gene for the variants* 2 c. 238 G> C,* 3A (c. 460 G> A and c. 719 A> G),* 3B (c. 460 G> A), and* 3C (c. 719 A> G). Results: Our results show that the TPMT variants associated with low enzymatic activity were detected in 3.25%(8 in 246) of adult Libyan individuals and the frequency of total mutant alleles was 1.63%. Heterozygous genotypes were TPMT* 3A in three subjects (0.61%) and TPMT* 3C in five subjects (1.02%). No TPMT* 2 and TPMT* 3B allelic variants and no homozygous or compound heterozygous mutant alleles were detected. The normal allele (wild-type) was found in 98.4% of the adult individuals studied. No mutant alleles were detected among the 50 children who had ALL. arabic 10 English 74
Hamza Ben Zeglam, Abdulla Bashein, (1-2015)
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A comparative evaluation of two DNA extraction protocols from whole blood sample

Every organism has deoxyribonucleic acid (DNA) within their cells. DNA is a complex molecule that contains all of the information needed to build and maintain living organisms. Extraction of deoxyribonucleic acid (DNA) is one of the most basic and critical steps affecting molecular-based techniques in the study of DNA that allow vast advances in genetic, molecular biology, biotechnology, forensic, and bioinformatics laboratories. Therefore, researchers have been used different modified and optimized protocols for efficient genomic DNA extraction from biological samples. Due to the high amount of genetic material in whole blood samples so it's one of the main sources used to obtain DNA and there are many different protocols available in this issue. In the present study, we optimized, evaluated by comparison to phenol-chloroform (traditional method) and silica column (QIAamp DNA Blood Mini Kit) DNA extraction procedures. The extracted DNA by these protocols was analyzed according to their time consuming, quality, quantity, cost and toxicity. Extracted DNA with current protocol was qualified using gel electrophoresis, Nanodrop spectrophotometric analysis. Our results showed that there are not significantly differences between these methods about DNA Purity (A260/A280) and DNA yield (ng DNA/μl). In addition, phenol/chloroform (traditional method) was the most toxic method; it takes more time but cheaper than other method; it yielded reasonably good quantities of good quality DNA and would be suitable for large-scale genotyping of blood samples. The silica column method (QIAamp DNA Blood Mini Kit) was the most expensive among the other method but the least extraction time was required and it was the safest method. arabic 11 English 69
Ghada Salem, Ahmed Zaid(1-2018)
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